Supplementary data for "Genetic parallels in biomineralization of the calcareous sponge Sycon ciliatum and stony corals"

Contents This file contains supplementary data for the article "Genetic parallels in biomineralization of the calcareous sponge Sycon ciliatum and stony corals" Calcarins_alphafold.tar.gz contains the alphafold output data for the structure prediction of selected Calcarins. Orthofinder/ contains proteomes that were used as input for Orthofinder, OrthoFinder result tables, and alignments of Calcarin orthogroups. SciHBWS01all_info.tsv is a tab-separated file with compiled information on the Sycon ciliatum transcriptome used for mapping (NCBI: HBWS00000000.1). Information for each transcript includes corresponding protein IDs and gene IDs, CDS and protein sequence, signal peptide prediction, identified pfam domains, BLAST hits against UniProt, and GO-terms of the best UniProt protein hit. Sycon_ciliatum_gene_predictions/ contains braker gene predictions as gtf-file for the Sycon ciliatum genome (GCA_964019385), using the mapped reads of this study (ERP163002) and predicted proteins from a Sycon ciliatumgenome from Norway (available at http://compagen.unit.oist.jp/datasets.html) as evidence. Sequences of predicted genes and proteins are provided alongside the InterProscan and Pfam annotations for the proteins. Sycon_spicule-peptides.sf3 is a Scaffold-file (.sf3) with information on the proteins identified in the spicule matrix. The Scaffold 5 software is required to open this file (available at https://www.proteomesoftware.com/products/scaffold-5).