Repository_Darnajoux et al_2023_CSBJ

This document is a repository of all the code and dataset used for the article “A Diazotrophy-Ammoniotrophy

Dual Growth Model for the sulfate-reducing bacteria Desulfovibrio vulgaris var. Hildenborough” by Darnajoux

R., Inomura, K., & Zhang. X., accepted for publication in the journal Computational and Structural

Biochemistry Journal in May 2023.

This document regroups all the code for the function required to use the Diazotrophic-Ammoniotrophic Dual

Cellular Model applied to the model Sulfate Reducing Bacteria Desulfovibrio vulgaris var. Hildenborough

grown under Pyruvate and Lactate as a electron source and the validation data set from batch culture growth

experiment.

The final figures from this document were edited from these raw figures using Adobe Illustrator before inclusion

in the article.

Communication can be addressed to Romain Darnajoux

(romaind(at)princeton(dot)edu or romain(dot)darnajoux(@)hotmail(dot)fr)