enrichment_meth60.tab
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资源简介:
Chromatin enrichment: Poisson regression, using selected sites as response, expected values (number of sites with that chromatin annotation in the dataset) as offset.
Enriched/Depleted when CI 95% of the log enrichment does not include 0.
Chromatin states from Epigenomic Roadmap sample E30 lifted to T2T/CMH13v2.
Test different IQR thresholds (0.10 to 0.35), increasing by 0.01 at each step.
Testing on interactions effects from INLA complete model without cell composition corrections on dataset Hrel60 to compare with brms.
Columns:
- IQR_threshold: IQR treshold used
- state: chromatin state
- enrichment: exp of mean value to transform to ratio
- mean: log enrichment
- 0.025quant: 95% CI lower bound
- 0.975quant: 95% CI upper bound
- enriched: boolean, TRUE 95% CI > 0
- depleted: boolean, TRUE 95% CI < 0
- status: enriched/depleted
提供机构:
UNIMI Dataverse
创建时间:
2026-03-19



