Transcriptomes of six Streptanthoid Complex species

To increase the number of genomic resources available for species of Streptanthoid Complex, we created transcriptomes for six jewelflower species. Focal species from six branches were selected to cover a majority of the phylogenetic tree. The goal is for these transcriptome sequences to aide future studies which look to explore the evolution and adaptation of the Streptanthoid Complex as it radiated throughout the California Floristic Province., Seed Source
The six species chosen for transcriptome sequencing were Caulanthus anceps, Caulanthus amplexicaulis, Caulanthus inflatus, Streptanthus breweri, Streptanthus glandulosus, and Streptanthus tortuosus. Seeds for these species were produced in a screenhouse at UC Davis in 2019 using field collected seeds from 2018 and stored in brown envelopes at room temperature. In 2021, these seeds were used to extract RNA under 10 different tissue and treatment combinations (Table 1).
Tissue and treatment combinations

Combination

Tissue

Treatment

Timepoints

1

Seed

Dry 20 °C

1

2

Seed

Chilled, Imbibed, 4 °C

1

3

Leaf

Normal, 20 °C

4

4

Leaf

Cold, 4 °C

4

5

Leaf

Hot, 40 °C

4

6

Leaf

Dark, 20 °C

4

7

Leaf

Drought, 20 °C

4

8

Root

Normal, 20 °C

1

9

Flower

Normal, 20 °C

1

10

Silique

Normal, 20 °C

1

Tissue Collection
For combination one, dry seeds were removed from their envelopes and immedia..., , # Transcriptomes of six Streptanthoid Complex species

[https://doi.org/10.5061/dryad.t1g1jwt99](https://doi.org/10.5061/dryad.t1g1jwt99)

Transcript sequences of *Caulanthus anceps, Caulanthus amplexicaulis, Caulanthus inflatus, Streptanthus breweri, Streptanthus glandulosus, and Streptanthus tortuosus.* Transcripts generated using the isON transcript analysis pipeline. Orthogroup data created using orthofinder.

## Description of the data and file structure

Transcriptomes: The 6 transcriptome fasta files[Proceed to Upload](https://datadryad.org/stash/resources/286074/upload)

* C. amplexicaulis = C.amplexicaulis_transcriptome.fasta
* C. anceps = C.anceps_transcriptome.fasta
* C. inflatus = C.inflatus_transcriptome.fasta
* S. breweri = S.breweri_transcriptome.fasta
* S. glandulosus = S.glandulosus_transcriptome.fasta
* S. tortuosus = S.tortuosus_transcriptome.fasta

OrthoFinder_Results.tar.gz = The output from orthofinder run using default settings

* Citations.txt
* P...