Additional file 1 of Large-scale kinetic metabolic models of Pseudomonas putida KT2440 for consistent design of metabolic engineering strategies

Additional file 1: Table S1. Steady state solution used in building kinetic model. Table S2.Comparison of experimentally observed and in silico obtained growth rates. Table S3. Abbreviations from Fig. 4. Table S4. Differences in directionalities between FBA and TFA. Table S5. Gene essentiality in rGEM (D2) and GEM. Table S6. Correlation between control coefficients of specific growth and ATP concentration with respect to most important enzymes. Table S7. Content of glucose minimal media. Table S8. Values of Michaelis constants for the Pseudomonas genus acquired from the Brenda database. Table S9. Allowable thermodynamically feasible concentrations of ATP with and without including SADT2 in the metabolic network of P. putida and E. coli together with the available experimental values.