Scripts, figures and output for "Oxygen intrusions sustain aerobic nitrite oxidation in anoxic marine zones" by Pearse J. Buchanan & colleagues.

Scripts for producing the visualisations, analysis and model results presented in the paper entitled "Oxygen intrusions sustain aerobic nitrite-oxidizing bacteria in anoxic marine zones" by Pearse James Buchanan & colleagues. Figures.tar holds the figures made with the python scripts Chemostat_model.tar holds the python code required for running the chemostat modelChemostat_output.tar holds the output of our experimentsOxicMAGS.txt and mumax_MAGS_gRodon.txt are required data files for fig5.py Other python scripts and figures seen in the full paper are held at https://doi.org/10.5281/zenodo.15139207 and were completed using jupyter notebooks on a memory intensive instance on the Expanse Super computer in San Diego. Please see those files for the remaining analysis. Contact [e-mail] or [e-mail] for any questions