Additional file 4 of Nepali oral microbiomes reflect a gradient of lifestyles from traditional to industrialized

Additional file 4: S3 Table—Oral microbiome differential abundance results from ALDEx2 with covariates age and sex. Oral microbiome genera tested for differential abundance across lifestyle with age and sex as covariates. Due to the lack of age data for the American Industrialists, only sex was included in the model tested with all individuals, whereas both sex and age were included in the model tested across the Nepali individuals. The glm module was utilized and p-value correction was applied using the Benjamini-Hochberg method. Both unadjusted (kw.ep) and adjusted p-values (kw.eBH) are shown, and adjusted p-value < 0.05 is the threshold for significance. Tab 1 shows the output for the glm model with no covariates and all individuals. Tab 2 shows the output for the glm model with sex as a covariate and all individuals. Tab 3 shows the output for the glm model with no covariates and only Nepali individuals. Tab 4 shows the output for the glm model with both sex and age as covariates and only Nepali individuals.