Additional file 7: Table T5. Gene Set Enrichment Analysis of differentially methylated positions. List of biological pathways (REACTOME) associated with the differentially methylated positions (p <
FIG5_scRNA_GSEA: GSEA analysis for tumor cells expressing high ERVK-7.long over low or none ERVK-7.long in scRNAFIG5_HML2_1q22_scRNA_EXP: expression matrix quantified by Brie for ERVK-7.long and ERVK-
Sup.Table.S4: Gene sets enriched in Man2a1-null B16F10 tumors vs control tumors treated with IgG isotype control. Pre-ranked gene set enrichment analysis (GSEA) was used to perform the analysis.
Additional file 12: Table S5 TRIM25-CIC-ATXN1L gene set enrichment analysis. A) Gene set enrichment analysis of upregulated discordant DE genes shared between TRIM25 vs CIC and TRIM25 vs ATXN1L. B) Ge
Columns indicate which gene set correlates with a normal (N) or irradiated (I) phenotype; the FDR associated with each correlation follows after a comma.*False Discovery Rate (FDR) denotes the probabi
