Additional file 14 of Dynamic nanopore long-read sequencing analysis of HIV-1 splicing events during the early steps of infection

Additional file 14: Table S7. Viral transcripts identified in HIV-1 infected T cells between 12 h and 24 h of infection and in viral particles. ONT sequencing reads mapping to each isoform expressed in infected CD4+ T cells from donor 4 at each time point, as well as reads produced from ONT sequencing of viral particles produced at 24 hpi were counted. The number of reads, the class of transcripts and the splice junctions involved are indicated. New exon combinations represented by less than 5 reads were not annotated (ND: not defined). N: New isoform identified in this study.