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InfoHiC models for cancer Hi-C prediction (T47D, 1Mb window, 40kb resolution)

NIAID Data Ecosystem2026-05-02 收录

癌症基因组结构

Hi-C数据预测

数据链接：

https://zenodo.org/record/10547764 数据链接链接失效反馈

官方服务：

资源简介：

InfoHiC models for cancer Hi-C prediction T47D 1Mb window 40kb resolution CSCN encoding

应用场景：

创建时间：

2024-05-16

癌症基因组结构

基因组调控

Higher order chromatin structure is important for regulation of genes by distal regulatory sequences. Structural variants that alter 3D genome organization can lead to enhancer-promoter rewiring and h

NIAID Data Ecosystem60

DNA methylation maintains integrity of higher order genome architecture (Hi-C)

表观遗传调控

癌症基因组结构

DNA replication timing and 3D chromatin organisation are associated with epigenomic changes across large domains during human differentiation and cancer progression. However, it is unclear if epigenom

NIAID Data Ecosystem50

Supplementary Table S2 from G-Quadruplex Structures Are Key Modulators of Somatic Structural Variants in Cancers

癌症基因组结构

G-四链体表观调控

Epigenetic data used in this study

NIAID Data Ecosystem40

Structural Variation with Nanopore Sequencing. Homo sapiens

纳米孔测序

癌症基因组结构

Nanopore sequencing of amplicons from structural variants associated with p16 and SMAD4 deletions. Samples were generated from pancreatic cancer cell lines.

NIAID Data Ecosystem50

Supplementary Table S1 from G-Quadruplex Structures Are Key Modulators of Somatic Structural Variants in Cancers

G-四链体与癌症变异

癌症基因组结构

in vivo G-quadruplex data used in this study

NIAID Data Ecosystem50