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资源简介：
Dataset used for pretraining and finetuning CodonTransformer. See paper at CodonTransformer Webpage
应用场景：
创建时间：
2024-08-24
相关数据集
Breinholt_et_al_allcodonpostion123_acrossLep
Nexus file containing codon position 1 & 2 & 3 for 557 loci and 75 taxa used to make dataset 1-3. See taxa_list.txt for species names of each taxon, this is a nucleotide nexus file with a CHARSET tha
DataONE2017-05-02 更新60
Amount of CpG sites in different codon positions.
C1pG2 is used to denote CpG site on the first and second codon positions; C2pG3 is on the second and third codon positions; C3pG4 is on the third codon position and the first position of the next codo
NIAID Data Ecosystem50
Breinholt_et_al_degen12_DS2
Dataset 2 (acrossLEP_AHE+PARTtrans). Nexus file containing codon position 1 & 2 for 557 loci and 75 taxa. See taxa_list.txt for species names of each taxon, this is a nucleotide nexus file with a CHAR
DataONE2017-05-18 更新40
Breinholt_et_al_allcodonpostion123_acrossLep
Nexus file containing codon position 1 & 2 & 3 for 557 loci and 75 taxa used to make dataset 1-3. See taxa_list.txt for species names of each taxon, this is a nucleotide nexus file with a CHARSET tha
DataONE2017-05-18 更新50
Phylogenetic information and informativeness (net and per-site) of genes and their codon partitions.
a: Parsimony Informative. b: Consistency Index. c: Retention Index. d: Maximum Parsimony. f: Analysis did not reach completion. Net informativeness could be calculated only for partitioned codon posit
NIAID Data Ecosystem40
