We used Earl Grey v5.1.0 (Baril et al. 2024) to predict repetitive DNA sequences de novo in the new chromosome-level assembly and retrieve a non-redundant species-specific repeat library. We us
RepeatMasker .out and .tbl output for the Ragout chromosome-level assembly for N. diardi and HiC assembly for N. nebulosa . Both assemblies were soft-masked.
This data set is part of the Polistes dominula genome project, and provides details regarding the annotation and masking of transposable elements and other repetitive sequences in the P. dominula geno
We annotated repeats in assemblies through two rounds of annotation with RepeatMasker4.1.0 (Smit et al. 2020), the first round used custom repeat libraries generated by RepeatModeler2 for each respect