Supporting information for "Gut microbiota parallelism and divergence associated with colonisation of novel habitats"

R scripts and data files used for analyzing bacterial community composition of cloacal swab samples from three lizard species (<i>Aspidoscleis inornata</i>, <i>Holbrookia maculata</i>, and <i>Sceloporus cowlesi</i>) from the White Sands, the Carrizozo lava flow, and the surrounding Chihuahuan desert in Southern New Mexico. The files are supporting information for our manuscript titled: "Gut microbiota parallelism and divergence associated with colonisation of novel habitats".