Phables v 1.1.0 benchmarking data and results

This record contains all the benchmarking datasets and results for the Phables manuscript. The datasets used are, A simulated dataset containing four phages Enterobacteria phage P22, Enterobacteria phage T7, Staphylococcus phage SAP13 TA-2022 and Staphylococcus phage SAP2 TA-2022, referred to as <strong>simPhage</strong> Water samples from Nansi Lake and Dongping Lake in n Shandong Province, China (NCBI BioProject number PRJNA756429), referred to as <strong>Lake Water</strong> Soil samples from flooded paddy fields from Hunan Province, China (NCBI BioProject number PRJNA866269), referred to as <strong>Paddy Soil</strong> Wastewater virome (NCBI BioProject number PRJNA434744), referred to as <strong>Wastewater</strong> Stool samples from patients with IBD and their healthy household controls (NCBI BioProject number PRJEB7772), referred to as <strong>IBD</strong> The simulated dataset was assembled using metaSPAdes and the real datasets were preprocessed using Hecatomb. The Lake Water dataset was also assembled using MEGAHIT (referred to as <strong>Lake Water - MEGAHIT</strong>) and metaSPAdes (referred to as <strong>Lake Water - metaSPAdes</strong>). The simulated dataset was run using Phables and evaluated using metaQUAST. All the real datasets were run using PHAMB and Phables and the genomes were evaluated using CheckV.