Raw and processed sequence data from Oxford Nanopore and BGI short read sequencing platforms used in the publication: "A pipeline for in-depth analysis of DNA virus populations by profiling the low ab

NIAID Data Ecosystem20

Pooled dengue prototype strains sequencing

登革热病毒基因组

病毒准种分析

The data are sequences of dengue prototype strains of four serotypes including strain Hawaii of serotype 1, strain 16681 and New Guinea C of serotype 2, strain H87 of serotype 3, and strain H241 of se

NIAID Data Ecosystem20

DNA-seq or genomic RNA region of HIV-1 reverse transcriptase, protease and integrase gene. DNA-seq or genomic RNA region of HIV-1 reverse transcriptase, protease and integrase gene

HIV-1基因测序

病毒准种分析

To assess compatibility in sequence analysis we compared results from Sanger sequencing (with sequencing threshold >15%) and Next Generation Sequencing (with sequencing treshold >5%). Totally, there w

NIAID Data Ecosystem20

Identification of quasispecies in JC virus genome in patients with progressive multifocal leukoencephalopathy by deep sequencing. JC polyomavirus

病毒准种分析

神经感染基因组学

JC virus (JCV) is a DNA virus and a causative agent of progressive multifocal leukoencephalopathy (PML) in immunodeficient patients. In the present study, we identified quasispecies in JCV genome in t

NIAID Data Ecosystem20

Isavirus salaris strain:HPR0 Site 10 Targeted Locus (Loci). Isavirus salaris strain:HPR0 Site 10

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