DRYAD-luscombe-reanalysis

Dryad2015-01-01 更新2026-04-13 收录

同义突变

长期进化实验

数据链接：

http://datadryad.org/resource/doi:10.5061/dryad.266g4/1 数据链接链接失效反馈

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资源简介：

This file contains all data, python, and R scripts needed to replicate our analysis of synonymous substitutions in a long-term evolution experiment at 40,000 generations.

创建时间：

2015-01-01

Evolution of gene expression in one population of the Long-Term Evolution Experiment with Escherichia coli

长期进化实验

细菌基因表达

We used microarrays to study the changes in whole-genome expression profiles accompanying the evolution of one bacterial population propagated in glucose minimal medium for 20,000 generations. We samp

NIAID Data Ecosystem80

Fitness of evolving bacterial populations is contingent on deep and shallow history but only shallow history creates predictable patterns

微生物进化适应性

长期进化实验

Long term evolution experiments have tested the importance of genetic and environmental factors in influencing evolutionary outcomes. Differences in phylogenetic history, recent adaptation to distinct

NIAID Data Ecosystem70

Code and Data associated with "Idiosyncratic purifying selection on metabolic enzymes in the long-term evolution experiment with Escherichia coli"

代谢酶进化

长期进化实验

Code and data sufficient to reproduce analyses in "Idiosyncratic purifying selection on metabolic enzymes in the long-term evolution experiment with Escherichia coli".

NIAID Data Ecosystem70

Description of all single-base mutations observed for each of the 50 lines of the 4 strains in the 200-day experiment.

微生物突变

长期进化实验

The table describes the position of the mutations in the (single contig) assembly of the ancestral strain, the inferred single base change, the category of site, whether or not the site is shared acro

NIAID Data Ecosystem80

The fitness landscape of the codon space across environments

适应度景观

同义突变

Fitness landscapes map the relationship between genotypes and fitness. However, most fitness landscape studies ignore the genetic architecture imposed by the codon table and thereby neglect the potent

DataONE2020-06-24 更新70

DRYAD-luscombe-reanalysis

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