Manuscript files
收藏NIAID Data Ecosystem2026-05-10 收录
下载链接：
https://figshare.com/articles/dataset/Manuscript_files/31683250
下载链接
链接失效反馈官方服务：
资源简介：
Results from Vasquez et al., 2026.
Currently included:
faa-reference_genomes-GVOG7-iqtree-perc1.mafft_t: mafft alignment file generated using GVMAGs from this study plus references
faa-reference_genomes-GVOG7-iqtree-perc1.treefile: iqtree files generated using GVMAGs from this study plus references
gvclass_popgen.tab: results from GVclass
ref_query_polb.fasta: alignment file used as input for pplacer. Alignment file was generated using a polb alignment from Endo et al., 2020 and the mafft --addfragments option
ref_query_polb.jplace: result from pplacer. Reference tree created by Endo et al., 2020
snps_all_file.rds: R data used in snps_robust_analysis.Rmd
snps_robust_analysis.Rmd: R markdown code used to analyze snps from Metapop.
LM_singelassembly_bins.gz: GVMAG bins from individual libraries from Lake Mendota (not co-assembly)
coassembly_fna.tar.gz: fna files from co-assembly GVMAG bins
coassembly_faa.tar.gz: faa files from co-assembly GVMAG bins
创建时间：
2026-03-12
