Processed single-cell multiome (RNA + ATAC) of the head of a four weeks post conception human embryo

Processed single-cell multiome (RNA + ATAC) of the head of a four weeks post conception human embryo This dataset contains a total of four samples: - 10X403_1 - 10X403_2- 10X403_3- 10X403_4 For each sample we provide: - scATAC-seq fragment file: <SAMPLE_ID>_ABCD_2_atac_fragments.tsv.gz- Index of scATAC-seq fragment file: <SAMPLE_ID>_ABCD_2_atac_fragments.tsv.gz.tbi- scATAC-seq cells passing filtering: <SAMPLE_ID>.cbs_custom_thresholds.tsv- scRNA-seq count matrix (matrix market format): <SAMPLE_ID>_ABCD_2_matrix.mtx.gz- scRNA-seq barcodes: <SAMPLE_ID>_ABCD_2_barcodes.tsv.gz- scRNA-seq gene symbols: <SAMPLE_ID>_ABCD_2_features.tsv.gz Cell metadata is available in: cell_data.tsv. We provide the results from topic modeling: - Cell topic probabilities of the subset of neural crest cells: neural_crest_cell_topic_contrib.tsv- Cell topic probabilities of the subset of neuron cells: neuron_cell_topic_contrib.tsv- Cell topic probabilities of the subset of progenitor crest cells: progenitor_cell_topic_contrib.tsv- Region topic probabilities of the subset of neural crest cells: neural_crest_region_topic_contrib.tsv- Region topic probabilities of the subset of neuron cells: neuron_region_topic_contrib.tsv- Region topic probabilities of the subset of progenitor cells: progenitor_region_topic_contrib.tsv md5 checksums are available in the file checksums.txt