Ephemera danica manual annotations on genome assembly Edan_1.0
收藏agdatacommons.nal.usda.gov2024-01-11 更新2025-03-23 收录
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https://agdatacommons.nal.usda.gov/articles/dataset/Ephemera_danica_manual_annotations_on_genome_assembly_Edan_1_0/24853557/1
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资源简介:
This dataset presents manual annotations of Ephemera danica genome annotations v0.5.3 and genome assembly v1.0. Manual annotations were performed by individual annotators in the Apollo software at the i5k Workspace@NAL, and QC'd via the GFF3toolkit software and manual inspection. Manual annotations are presented here on the original coordinate system of genome assembly v1.0.
Resources in this dataset:Resource Title: Ephemera danica manual annotations on genome assembly Edan_1.0 . File Name: ephdan_manual_annotations.tar.gzResource Description: The attached tar.gz archive (ephdan_manual_annotations.tar.gz) contains the following files:
- ephdan_manual_annotations_cds.fa: CDS sequences of the Ephemera danica manual annotations.
- ephdan_manual_annotations.gff: GFF3 file of the Ephemera danica manual annotations.
- ephdan_manual_annotations_pep.fa: Protein sequences of the Ephemera danica manual annotations.
- ephdan_manual_annotations_trans.fa: RNA sequences of the Ephemera danica manual annotations.
本数据集展示了 Danica 短角负子虫基因组注释 v0.5.3 及基因组组装 v1.0 的手工注释。手工注释由个别注释者在 i5k Workspace@NAL 的 Apollo 软件中完成,并通过 GFF3toolkit 软件及人工检查进行质量控制。手工注释以基因组组装 v1.0 的原始坐标系统在此呈现。数据集中包含以下资源:
资源标题:Danica 短角负子虫基因组组装 Edan_1.0 上的手工注释
文件名:ephdan_manual_annotations.tar.gz
资源描述:附带的 tar.gz 归档文件(ephdan_manual_annotations.tar.gz)包含以下文件:
- ephdan_manual_annotations_cds.fa:Danica 短角负子虫手工注释的编码序列
- ephdan_manual_annotations.gff:Danica 短角负子虫手工注释的 GFF3 文件
- ephdan_manual_annotations_pep.fa:Danica 短角负子虫手工注释的蛋白质序列
- ephdan_manual_annotations_trans.fa:Danica 短角负子虫手工注释的 RNA 序列。
提供机构:
agdatacommons.nal.usda.gov



