apomixis_parallel_evolution, and Fortunella hindsii (Citrus hindsii )Genome sequencing and assembly

##The assemble(genome) files Citrus hindsii (Mini citrus)Genome assembly Citrus hindsii (Mini citrus)Genome assembly gene model gff3 file Citrus hindsii (Mini citrus)Genome assembly function annotation Citrus hindsii (Mini citrus)Genome assembly TE gff3 file ##The population dataset LD_pur.vcf.gz //The LD purning SNP vcfs (1.4 M sites) used in analysis <br> log10_auxin.txt //The expression (log10) related to auxin pathway <br> sjg.temergedref.fasta.gz //The TE insertion modify genome in popTE2 analysis <br> SVs.vcf.gz //The SV vcfs used in the paper <br> te-hierarchy.txt //The TE classfication in popTE2 analysis <br> TPM_count.txt //All samples expression in TMP count <br> unfiltered.vcf.gz //The unfiltered vcfs file (7.3 M sites, within 0.4 M indels)