Genome wide Transcription Start site prediction in Rhizobium leguminosarum 3841 by dRNAseq

NIAID Data Ecosystem2026-03-12 收录

转录起始位点

根瘤菌共生转录组

数据链接：

https://www.ncbi.nlm.nih.gov/sra/SRP286623 数据链接链接失效反馈

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资源简介：

Identifying TSS in legume symbiont Rhizobium leguminosarum 3841 during different growth stages during symbiosis

创建时间：

2020-11-18

Re-processing of the data generated by the FANTOM5 project (hg38 v3)_CAGE_peaks

基因组学

转录起始位点

CAGE peaks === This folder contains the CAGE peaks defined in the FANTOM5 project as a robust set, where genomic coordinates originally defined on hg19 are lifted to hg38 by liftOver tool. By fol

DataCite Commons2020-09-02 更新90

Re-processing of the data generated by the FANTOM5 project (hg38 v3)_CAGE_peaks_annotation

基因表达

转录起始位点

Annotation files = Transcript association * (Human phase1+2 set) hg38_liftover+new_CAGE_peaks_phase1and2_trans.txt (Format) 1) CAGE peak ID "(Old FANTOM5 CAGE Peak ID);(new TSS ID)" 2) Associated

Figshare2017-04-17 更新70

SLIC-CAGE (Super-Low Input Carrier-CAGE) transcription start site mapping of mouse migratory and gonadal primordial germ cells, postnatal oocytes and early embryo

生殖细胞启动子重塑

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We used SLIC-CAGE to map transcription start sites (TSSs) of mouse primordial germ cells from embryonic days 9.5-16.5, postnatal oocytes (P6, P14 and MII), and early 2-cell and 4-cell mouse embryos.

Alliance of Genome Resources40

Analysis of transcription start sites from nascent RNA identifies a unified architecture of initiation at mammalian promoters and enhancers (GRO-cap)

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表观遗传调控

Despite the conventional distinction between promoters and enhancers, they share many features in mammals, including divergent transcription and similar modes of transcription factor (TF) binding. Her

NIAID Data Ecosystem70

Genome-Wide Identification of Transcription Start Sites, Promoters and Transcription Factor Binding Sites in E. coli

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大肠杆菌基因

Despite almost 40 years of molecular genetics research in Escherichia coli a major fraction of its Transcription Start Sites (TSSs) are still unknown, limiting therefore our understanding of the regul

NIAID Data Ecosystem60

Genome wide Transcription Start site prediction in Rhizobium leguminosarum 3841 by dRNAseq

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