Supplemental Data Accepted Version

Data Set S1. Zip file containing gene expression matrix and transcript expression matrix for all 10 samples used in this study.Data Set S2. Zip file containing interactive version of Figure 3A.Data Set S3. Zip file containing interactive version of Figure 3B. Table S1. Docx file comparing transcripts per million mapped reads (TPM) for each bat tissue sample to samples from bats without P. destructans infections.Table S2. Xlsx file comparing expression analysis for Culture and MyLu samples using both edgeR and DESeq2. Trinotate annotation results are also shown for all transcripts and predicted coding sequences. Genes with multiple annotated coding sequences are listed once for each annotation. A legend for each column is contained in the second tab of the spreadsheet.Figure S1. Pdf file showing a volcano plot of the expression level changes (in log2 fold change) and differential expression FDR (in –log10) for both M. lucifugus and P. destructans genes in the MyLu samples compared to M. lucifugus samples uninfected with P. destructans. M. lucifugus genes are shown in green (FDR > 0.001) or orange (FDR ≤ 0.001). P. destructans genes are shown in blue (FDR > 0.001) or pink (FDR ≤ 0.001).