Tara Oceans analysis files
收藏资源简介:
Input files used for running Tara Oceans analysis. <br> Includes: GToTree_output_modified.tre - Newick tree of MAGs kegg_pathways and kegg_modules - folders containing KEGG pathway and module abundance tables per MAG Table_S1_sample_info.txt - Sample metadata Table_S11_KO_abun.txt - KO copy number per MAG TARA_abundance_min_mean_coverage1.tsv - MAG abundance table (based on minimum breadth of coverage of 1%) <br>
本数据集为用于开展塔拉海洋(Tara Oceans)分析的输入文件。 具体包含:GToTree_output_modified.tre——针对宏基因组组装基因组(Metagenome-Assembled Genomes,MAG)的Newick格式进化树;kegg_pathways与kegg_modules文件夹——包含各MAG的京都基因与基因组百科全书(Kyoto Encyclopedia of Genes and Genomes,KEGG)通路与模块丰度表;Table_S1_sample_info.txt——样本元数据文件;Table_S11_KO_abun.txt——各MAG的KEGG直系同源基因(KEGG Orthology,KO)拷贝数文件;TARA_abundance_min_mean_coverage1.tsv——基于1%最小覆盖广度构建的MAG丰度表。




