The evolution of antibiotic resistance islands occurs within the framework of plasmid lineages

Supplementary data for "The agglomeration of antibiotic resistance genes in resistance islands is biased towards specific large plasmid lineages".This folder contains the data of collinear syntenic blocks (CSBs) in the analysis of plasmid resistance islands in 2,441 genomes from Escherichia, Salmonella, and Klebsiella.csb.amr.ins0.q4.csb: CSB result file calculated using CSBFinder-Sinfo.csb.amr.fasta: Orthology information file of gene families as an optional input file for CSBFinder-Scsb.data.tsv: Gene content table for retrieving CSB sequence from the genomes in RefSeq database.GuideVideo: In this video, I show an example of how to use CSBFinder-S to explore CSB data for resistance island analysis.Supplementary Data 8 contains the phylogenetic data of five transposase gene families, Rop, and RepB.