Select known and novel motifs found by FIRE-pro.
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https://figshare.com/articles/dataset/_Select_known_and_novel_motifs_found_by_FIRE_pro_/480177
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Known: matches previously identified; Semi-novel: matches sequence but has distinct biological context; Novel: no match.
Select (a) known, (b) semi-novel, and (c) novel motifs discovered by FIRE-pro. Known motifs match previously identified motifs in the literature in both sequence and biological context. Semi-novel motifs match previously identified motifs in sequence but not in biological context. Novel motifs do not match any previously identified motif. Motifs presented here were selected based on a combination of criteria including high mutual information and z-score, low domain overlap score, positional bias, GO enrichment, and similarity to known motifs. Name refers to the dataset in which the motif was discovered and is abbreviated as follows, GO: term = binary profile of proteins annotated to the GO term; Protein: description = binary profile of proteins interacting with the protein; Localization: compartment = binary profile of proteins localized to the cellular compartment. See Text S1 for further description of datasets.
创建时间:
2010-12-29



