Metagenome assemblies and metagenome-assembled genomes from the Daphnia magna microbiota

Metagenome assemblies generated from raw reads not mapping to the Daphnia magna genome for six samples assembled individually (G4, G14, S1-S4) and a coassembly of all six samples (a_assembly) using metaSPAdes in SPAdes v3.14. Assemblies can be found in metagenome_assemblies.zip.

Metagenome-assembled genomes generated using VAMB v3.0.2 (vamb_bins.zip) and ProxiMeta (proximeta_bins.zip). These MAGs were taxonomically identified using GTDB-Tk v1.3 and quality checked using CheckM v1.1. Outputs from GTDB-Tk and CheckM can be found in the .tsv and .tab files, respectively.