Data for "Tetramine Aspect Ratio and Flexibility Determine Framework Symmetry for Zn8L6 Self-Assembled Structures"
收藏NIAID Data Ecosystem2026-05-01 收录
下载链接:
https://zenodo.org/record/11033747
下载链接
链接失效反馈官方服务:
资源简介:
In the following subdirectories are the input and outputs of cage and face analysis for:
Published DOI: 10.1002/anie.202217987
Code: sca_cage_assembler
Previously uploaded in 10.5281/zenodo.8432296 and https://github.com/andrewtarzia/citable_data
NOTES:
the naming convention differs from manuscript:
manuscript tetra-aniline
computational label
xtal-label
A
5
370
B
16
326
C
12
235
D
3
301
E
8
257
F
2
354
computational labels are often preceded by `quad2_` or `cl1_quad2_`
much of the analysis was not used in the manuscript but remains part of the accumulated data
cage_library directory:
_CS.json: information on all cages in the set of diastereomers - properties and whether they optimized successfully.
_ligand_measures.json: information on the ligand associated with a set of cage diastereomers.
_measures.json: represenets a cleaned up collation of all measures the diastereomers made from a given ligand
C_NAME_optc.mol: optimized (at xTB level) structure of each cage.
set_dft_run directory contains the input and output of the CP2K optimisations of one set of diastereomers
complex_library directory:
contains the optimised structures of both complexes
ligand_library directory:
contains `_opt.mol` input ligand structures for cage construction
for cap, the input was provided manually in `manual/` directory
in `face_analysis` directory:
contains manual_complex directory, with necessary input for face construction
_long_properties.json files contains the measurements for the named face (in file name)
_long_lopt.mol files contain the optimised structure of the named face, on which analysis was performed
`long` corresponds to the longer restricted optimization discussed in the SI.
xray_structures directory:
analysis directory:
contains input .pdb files for xray structure (as single molecules) used in analysis
contains `all_xray_csv_data.csv`, which has all data needed on xray structures.
创建时间:
2024-05-01



