Data for "The evolution of gene functional repertoire in Amorphea: Divergent strategies across Amoebozoa, Fungi, and Metazoa"

Collection of data used in the study:“The evolution of gene functional repertoire in Amorphea: Divergent strategies across Amoebozoa, Fungi, and Metazoa”Find related code and input files descriptions in GitHubSupplementary video and file information:pipeline_input_files.tar. Input files for Github.Supplementary Video 1. BEAP0066, floating form. Video accelerated to x150 normal speed. Total time elapsed = 1.2 h.Supplementary Video 2. BEAP0066, contact of subpseudopodia. Video accelerated to x150 normal speed. Total time elapsed = 1.6 h.Supplementary Video 3. BEAP0066, double-amoeba. Video accelerated to x150 normal speed. Total time elapsed = 5.8 h.Supplementary Video 4. BEAP0066, rings in solid medium. Video accelerated to x300 normal speed. Total time elapsed = 2.9 h.BEAP0066_tsa_transcriptome.fasta. Apostamoeba explorator transcriptome.BEAP0079_tsa_transcriptome.fasta. Vannella septentrionalis transcriptome.BEAP0066_proteome.fasta. Apostamoeba explorator proteome.BEAP0079_proteome.fasta Vannella septentrionalis proteome.Supplementary File 1. Classification of COG categories in dictyostelids according to their relative similarity to Fungi or Amoebozoa.Supplementary File 2. Differentially expressed Pfam clans per taxonomic group.Supplementary File 3. Genomes used for transcriptome decontamination.Supplementary File 4. Sequences used in rRNA figures.Supplementary File 5. 18S full alignment with the sequence mask.Supplementary File 6. 18S trimmed alignment.Supplementary File 7. Newick tree for Supplementary Figure 1.Supplementary File 8. V4 full alignment with the sequence mask.Supplementary File 9. V4 trimmed alignment.Supplementary File 10. Newick tree for Supplementary Figure 2.Supplementary File 11. Species used in the project with source and name abbreviation.Supplementary File 12. Newick tree for Figure 1.Supplementary File 13. Scanning electron microscopy additional images.Supplementary File 14. Transmission electron microscopy additional images.