five

Pooled metagenomic sequence from human stool

收藏
NIAID Data Ecosystem2026-03-08 收录
下载链接:
http://datadryad.org/dataset/doi%253A10.7272%252FQ61Z429D
下载链接
链接失效反馈
官方服务:
资源简介:
This dataset corresponds to the data presented in "The complete genome of klassevirus – a novel picornavirus in pediatric stool" by Greninger et al (http://www.ncbi.nlm.nih.gov/pubmed/19538752). Methods 141 diarrhea samples were prepared, pooled, and pyrosequenced on the Roche Genome Sequence FLX as described in "The complete genome of klassevirus – a novel picornavirus in pediatric stool" by Greninger et al (http://www.ncbi.nlm.nih.gov/pubmed/19538752). A novel member of the Picornaviridae viral family, Human klassevirus 1, was discovered in the 540,412 unique reads with an average length of 240 nt. The reads were stripped of sequences mapping with 90% or greater identity to known diarrhea-causing viruses: 6,959 reads mapped to the Adenoviridae and Caliciviridae viral families by translated BLAST. Of the remaining 533,453 unique reads, 483 derived from Human klassevirus 1. The data are provided in FASTA format.
创建时间:
2014-06-12
5,000+
优质数据集
54 个
任务类型
进入经典数据集
二维码
社区交流群

面向社区/商业的数据集话题

二维码
科研交流群

面向高校/科研机构的开源数据集话题

数据驱动未来

携手共赢发展

商业合作