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VFDB

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下载链接:
https://figshare.com/articles/dataset/VFDB/16413252
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资源简介:
A VFDB report provides information of the virulence factors in each sample. Template: Hit of virulence genes in VFDB Function: Predicted function of the template Genome: Strain names where the template is found Score, Expected, Template_length, Template_Identity, Template_Coverage, Query_Identity, Query_Coverage, Depth, q_value, p_value: Parameters output by VFDB that report how well the match is. shotgunReadcount: Number of reads for each sample after decontamination of human reads RelavantPercentInVF: The number of reads matched to the virulence gene / Total reads matched to virulence genes in the sample PercentageInShotgun: The number of reads matched to the virulence gene / Total reads in the sample SampleID: Sample ID for each shotgun sequencing
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2021-08-23
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