VFDB
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下载链接:
https://figshare.com/articles/dataset/VFDB/16413252
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资源简介:
A VFDB report provides information of the virulence factors in each sample.
Template: Hit of virulence genes in VFDB
Function: Predicted function of the template
Genome: Strain names where the template is found
Score, Expected, Template_length, Template_Identity, Template_Coverage, Query_Identity, Query_Coverage, Depth, q_value, p_value: Parameters output by VFDB that report how well the match is.
shotgunReadcount: Number of reads for each sample after decontamination of human reads
RelavantPercentInVF: The number of reads matched to the virulence gene / Total reads matched to virulence genes in the sample
PercentageInShotgun: The number of reads matched to the virulence gene / Total reads in the sample
SampleID: Sample ID for each shotgun sequencing
创建时间:
2021-08-23



