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Additional file 1: Table S1. of ENVE: a novel computational framework characterizes copy-number mutational landscapes in colorectal cancers from African American patients

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Cohorts, ethnicity, and tumor stage of samples used for WES, SNP array, and qPCR. Table S2. Regions with significant copy-number alterations, as detected by ENVE, in the 30 AA CRC WES cases. Table S3. Regions with significant copy-number alterations, as detected by ENVE, in the 30 predominantly late-stage Caucasian TCGA CRC WES cases. Table S4. Recurrent somatic copy-number altered regions in the 30 AA CRC WES cases estimated by GISTIC. Table S5. Recurrent focal copy-number amplifications and deletions in the 30 AA CRC WES cases estimated by GISTIC. Table S6. Chromosomal arm-level sCNA frequencies in AA and TCGA CRCs estimated by GISTIC. (XLSX 535 kb)
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2016-12-16
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