Additional file 1: of The native microbiome of the nematode Caenorhabditis elegans: gateway to a new host-microbiome model

Data and results from statistical analysis of the native and experimental microbiome of C. elegans. This document contains a total of 23 tables as sheets of an Excel file, which summarize the material used and the results of the statistical analyses. Table S1-1. List of samples used for analysis of the Caenorhabditis native microbiome. Table S1-2. Summary of sample numbers used for analysis of the Caenorhabditis native microbiome. Table S1-3. Top 100 operational taxonomic units (OTUs) of the native microbiome of Caenorhabditis elegans. Table S1-4. Top 100 OTUs of the native microbiome of Caenorhabditis remanei. Table S1-5. Top 100 OTUs of the native microbiome of Caenorhabditis briggsae. Table S1-6. Statistical comparison of bacterial taxa abundances among sample types for the native Caenorhabditis microbiome. Table S1-7. Statistical evaluation of the factors for the canonical correspondence analysis of the native Caenorhabditis microbiome. Table S1-8. Statistical evaluation of the factors for the multivariate analysis of variance of the native Caenorhabditis microbiome. Table S1-9. List of bacterial and fungal isolates from natural C. elegans samples or corresponding substrates. Table S1-10. Overview of sample sizes for analysis of the experimental microbiome. Table S1-11. Overview of included and excluded samples in the analysis of the experimental microbiome. Table S1-12. Statistical comparison of bacterial taxa abundances among sample types for the experimental C. elegans microbiome. Table S1-13. Statistical evaluation of the factors for the canonical correspondence analysis of the experimental C. elegans microbiome. Table S1-14. Statistical evaluation of the factors for the multivariate analysis of variance of the experimental C. elegans microbiome. Table S1-15. Statistical comparison of bacterial taxa abundances among sample types for the second experiment with the experimental C. elegans microbiome. Table S1-16. Statistical evaluation of the factors for the canonical correspondence analysis of the second experiment with the experimental C. elegans microbiome. Table S1-17. Raw data for the bacterial colonization experiment. Table S1-18. Raw data for the population growth experiment with the experimental microbiome under different conditions. Table S1-19. Statistical analysis of C. elegans population growth on the experimental microbiome under different conditions. Table S1-20. Raw data for the population growth experiment with individual bacterial isolates. Table S1-21. Statistical analysis of C. elegans population growth on individual bacterial isolates. Table S1-22. Raw data for the analysis of bacterial effects on fungal growth. Table S1-23. General linear model analysis of antifungal effects of three Pseudomonas isolates. Table S1-24. Raw data for the bacterial effect on Drechmeria-induced worm killing. Table S1-25. Statistical analysis of an in vivo antifungal effect of Pseudomonas MYb11. (XLSX 116 kb)