(16s) No 2. Data Preparation (16S rRNA) Output

Output files from the No 2. Data Preparation Workflow page of the Bocas Hypoxia study. File names and descriptions: *seq_table.txt, *_tax_table.txt, *_asv.fasta: Sequence tables, taxonomy tables, and ASV fasta files from the full phyloseq object (before removing contaminants) and the trimmed dataset (after removing contaminants). 16s-data_prep.rdata: contains all variables and phyloseq objects from the data prep pipeline. To see the Objects, in R run load("16s-data_prep.rdata", verbose=TRUE)