Example Files for pRESTO Greiff et al, 2014
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https://zenodo.org/record/14531394
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资源简介:
This example uses publicly available data from:
Quantitative assessment of the robustness of next-generation sequencing of antibody variable gene repertoires from immunized mice.Greiff, V. et al.BMC Immunol. 2014. 15(1):40. doi:10.1186/s12865-014-0040-5.
Which may be downloaded from the EBI European Nucleotide Archive under accession ID: ERP003950. For this example, we will use the first 25,000 sequences of sample Replicate-1-M1 (accession: ERR346600), which may downloaded using fastq-dump from the SRA Toolkit:
fastq-dump --split-files -X 25000 ERR346600
Primers sequences are available in additional file 1 of the publication.
创建时间:
2024-12-19



