aThe average k-mer depth of the variant portion of the assembly divided by the average k-mer depth of same-sized regions immediately on either side of the variant sequence. bThe frequency in the prese

NIAID Data Ecosystem60

Ca. T. endolucinida core gene nucleotide alignment to infer recombination to mutation ratio

细菌基因组重组

微生物进化分析

To infer recombination events in bacterial genomes, we used the maximum likelihood implementation of ClonalFrame, ClonalFrameML. MAGs (only high quality) were aligned with progressiveMauve, which is p

Figshare2020-11-27 更新30

leaf metagenome Genome sequencing and assembly. leaf metagenome

柑橘黄龙病病原体基因组

病原体基因组测序与组装

The draft genome sequence of an isolate of Candidatus Liberibacter asiaticus from a mandarin tree in Coorg, South India is reported here. The draft genome has a total length of 1,207,426 bp, with a G+

NIAID Data Ecosystem60

S.pneumoniae recombination products

细菌基因组重组

肺炎链球菌测序分析

Raw data necessary to rebuild the project of reanalysis I've done on the sequencing projects of Lauren Cowley et al, 2018 (see links below).

Figshare2019-09-24 更新50