Assignment of samples based upon AFLPOP analysis of band frequencies at each collection depth.

Assignments percentages based upon 500 simulations. A) Samples assigned to depths with the highest likelihood. B) Assignments with log likelihood threshold set to 0. Samples assigned to a depth only if the next most likely assignment is 10 fold less. Samples assigned to “None” could not be assigned to a single depth with a probability 10 fold greater than any other depth. Proportions of individuals “correctly” assigned back to population from which they were collected are on the diagonal.