Phylogenetic datasets for Mouchet et al. (2026) Phylogeny of SK potassium channels and functional characterization of the conserved phenylalanine in their S3–S4 loop through mutational analysis

# Mouchet et al. 2026: Archive content for v1 ## Overview ├── command-line.sh ├── fasta │ ├── Alignement_SK_F.fa │ ├── Alignement_SK_Y.fa │ ├── hmmer-search-full.fasta │ ├── hmmer-search-full-pr-cdh.fasta │ ├── hmmer-search-full-pr.fasta │ ├── linsi_SK_F.fasta │ ├── linsi_SK_F-renamed.fasta │ ├── linsi_SK_F-renamed-ts.fasta │ ├── linsi_SK_Y.fasta │ ├── linsi_SK_Y-renamed.fasta │ ├── ts_linsi_SK_F_Y-renamed-a2p.fasta │ ├── ts_linsi_SK_F_Y-renamed.fasta │ ├── ts_linsi_SK_F_Y-renamed-pr_realing-enriched-ts_hmm-a2p.fasta │ ├── ts_linsi_SK_F_Y-renamed-pr_realing-enriched-ts_hmm-a2p-id.fasta │ ├── ts_linsi_SK_F_Y-renamed-pr_realing-enriched-ts_hmm.fasta │ └── ts_linsi_SK_F_Y-renamed-pr_realing.fasta ├── hmmer │ └── hmmer-search.tsv ├── phylogeny │ ├── new-enriched-full-dataset-auto.contree │ ├── new-enriched-full-dataset-auto.log │ ├── new-enriched-full-dataset-auto.treefile │ ├── new-enriched-full-dataset-auto.ufboot │ ├── SK_F-Y.contree │ ├── SK_F-Y.idm │ ├── SK_F-Y.log │ ├── SK_F-Y.treefile │ └── SK_F-Y.ufboot ├── README.md └── script └── cdhit-tax-filter.pl 4 directories, 29 files - `README.md`: this file. - `command-line.sh`: examples of bash commands to use or generate the files stored in this archive. ## fasta This directory contains FASTA files corresponding to intermediate and final datasets used at different steps of the phylogenetic analyses. ## hmmer This directory contains the tabular (.tsv) output dowloaded from the HMMER webserver. Searches were performed against Reference Proteomes (release 2025_01), and the file contains metazoan hits with associated alignment and score metrics. ## phylogeny This directory contains raw IQ-TREE outputs for both preliminary and final SK-channel trees. ## script Perl script used to deduplicate protein sequences at species level.