Scripts and files for "Small-scale population divergence is driven by local larval environment in a temperate amphibian"

Rana arvalis eggs were collected from populations inhabiting ponds in a small scale network of interconnected wetlands and raised in a common garden untill metamorphosis. We also measured a number of environmental and landscape variables within and around each pond. DNA was extracted from individual metamorphs and sequenced using a ddRAD-seq approach and sequencing data were processed in STACKS v2.1. Filtered variant files were analyzed using various population genetics/landscape ecology packages in R.