Barking Up the Right Tree: RNA-seq Data for Immune Checkpoint Study in Humans and Dogs

This archive contains input data and processed objects associated with the RNA-seq analysis described in: Barking Up the Right Tree: Immune Checkpoint Signatures of Human and Dog CancersPreprint: https://doi.org/10.1101/2024.06.26.600825 (currently in review at PLOS Computational Biology) Structure:- INPUT/: All raw and filtered input files used in the R analysis (.tsv from Kallisto, .gtf annotation, filtered data and metadata tables)- OUTPUT/: DESeq2-processed object (`BarkingUpTree_DDS_processed.RData`) used to generate figures and tables For corresponding code and instructions, see the GitHub repository: https://github.com/MikolajKocikowski/BarkingUpTree-ploscbThe original raw datasets analyzed in this project are described and cited in the associated manuscript.