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De novo genome assembly of Leptodactylus fuscus

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DataCite Commons2025-06-01 更新2025-06-15 收录
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https://datadryad.org/dataset/doi:10.5061/dryad.hmgqnk9gn
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This presents a de novo genome assembly of Leptodactylus fuscus. High molecular weight DNA was extracted from a L. fuscus embryo which had been preserved in ethanol upon collection in Garzón, Huila, Colombia. The library was prepared and sequenced with 10X Genomics Chromium. Linked reads were processed by Long Ranger basic v2.2.2 and assembled with Supernova v2.1.1. The assembled genome is 2.42 Gb with 16,530 scaffolds >=10 kb, and scaffold N50 = 363 kb. The assembly size of contigs larger than 10 kb (1.26 Gb) is about half of the estimated genome size (2.4 Gb). 72.6% of the BUSCO Tetrapoda gene annotations (version odb10) were identified.
提供机构:
Dryad
创建时间:
2021-04-23
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