遇见数据集

DCSsim (simulated) and DCSsub (sub-sampled) ChIP-seq data from different chromosomes.

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Zenodo2022-05-24 更新2026-05-25 收录
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资源简介:

These data are the results from three independent runs of DCSsim and DCSsub for TF, sharp and broad mark signals in 50:50 regulation scenarios for mm10 chr1, chr8, chr11, chr19 and chrX. Simulated data from DCSsim: simulated_ChIP-seq_data.zip set1: TF 50:50 chr11<br> set4: TF 50:50 chr8<br> set7: TF 50:50 chrX<br> set10: TF 50:50 chr1<br> set22: TF 50:50 chr19 set2: Sharp mark 50:50 chr11<br> set5: Sharp mark 50:50 chr8<br> set8: Sharp mark 50:50 chrX<br> set11: Sharp mark 50:50 chr1<br> set23: Sharp mark 50:50 chr19 set3: Broad mark 50:50 chr11<br> set6: Broad mark 50:50 chr8<br> set9: Broad mark 50:50 chrX<br> set12: Broad mark 50:50 chr1<br> set24: Broad mark 50:50 chr19 <br> Sub-sampled data from DCSsub: sub-sampled_ChIP-seq_data.zip Set1: C/EBPa-ChIP-seq 50:50 chr11<br> Set2: C/EBPa-ChIP-seq 50:50 chr8<br> Set3: C/EBPa-ChIP-seq 50:50 chrX<br> Set4: C/EBPa-ChIP-seq 50:50 chr1 Set5: H3K27ac-ChIP-seq 50:50 chr11<br> Set6: H3K27ac-ChIP-seq 50:50 chr8<br> Set7: H3K27ac-ChIP-seq 50:50 chrX<br> Set8: H3K27ac-ChIP-seq 50:50 chr1 Set9: H3K36me3-ChIP-seq 50:50 chr11<br> Set10: H3K36me3-ChIP-seq 50:50 chr8<br> Set11: H3K36me3-ChIP-seq 50:50 chrX<br> Set12: H3K36me3-ChIP-seq 50:50 chr1 <br> C/EBPa-ChIP-seq 50:50 chr19 can be found in sub-sampled_ChIP-seq_data.zip of the FRIP data set (DOI: 10.5281/zenodo.6042902 set8)<br> H3K27ac-ChIP-seq 50:50 chr19 can be found in sub-sampled_ChIP-seq_data.zip of the FRIP data set (DOI: 10.5281/zenodo.6042902 set9)<br> H3K36me3-ChIP-seq 50:50 chr19 can be found in sub-sampled_ChIP-seq_data.zip of the FRIP data set (DOI: 10.5281/zenodo.6042902 set10)

提供机构:
Zenodo
创建时间:
2022-05-06
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