List of 34 non-synonymous single nucleotide polymorphisms exclusively shared between strains HBJ4-3, HBJ6-1 and HBJ6-3.

Chr-Position, position of non-synonymous SNPs on the indicated chromosome (Ca22chrx, where x designates chromosome number, followed by position of SNP on the corresponding chromosome) according to the C. albicans genome Assembly 22, version A22-s07-m01-r57; ORF name, systematic nomenclature of ORF where are located differential non-synonymous SNPs (haplotypes A and B) in strains HBJ4-3, HBJ6-1 and HBJ6-3 relative to SNPs present in the remaining 15 CF02 isolates; Gene name, name of the gene corresponding to ORF where the non-synonymous SNPs are located; Polymorphism, nature of differential polymorphism in strains HBJ4-3, HBJ6-1 and HBJ6-3 relative to those present in the remaining 15 CF02 isolates; Amino acid change, deduced amino acid change in the predicted protein sequence of the ORF where the non-synonymous SNP from strains HBJ4-3, HBJ6-1 and HBJ6-3 is located; SC5314, polymorphic nucleotide in haplotypes A and B of the reference genome; HBJ1 to HBJ8-4, SNPs (haplotypes A and B) relative to polymorphic nucleotide from strain SC5314 are listed for each of the 18 serially recovered clinical isolates from patient CF02. The non-synonymous SNPs carried by strains HBJ4-3, HBJ6-1 and HBJ6-3 are highlighted in light gray. (XLSX)