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Additional file 4: Table S3. of Identification and annotation of conserved promoters and macrophage-expressed genes in the pig genome

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Table S3A: Locations of FANTOM5 mouse promoters mapped to the pig genome. Table contains the following columns (left to right): FANTOM5 mouse promoter ID, Ensembl gene ID associated with the FANTOM5 mouse promoter, mapping locations to the pig genome (Sscrofa10.2), the nearest pig Ensembl ID to the mapped promoter (strand-specific) and the number of pig CAGE CTSS and/or RNA-Seq signal (assembled transcripts from pooled macrophage libraries) located within a 20 Kb window from the 3’-end of the mapped promoter. Table S3B: Locations of FANTOM5 mouse promoters mapped to the human genome. Table contains the following columns (left to right): FANTOM5 mouse promoter ID, Ensembl gene ID associated with the FANTOM5 mouse promoter, mapping locations to the human genome (hg19), the nearest human Ensembl ID to the mapped promoter (strand-specific). (ZIP 2981 kb)
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2016-12-14
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