Data from: Population genomics and connectivity of the blue mussel species complex: Insights from a North-east Atlantic hybrid zone

Blue mussels (Mytilus spp.) are ecologically and economically important
bivalves widespread in both hemispheres. Their relevance to coastal
ecosystems and the aquaculture industry has made them extensively studied.
The Mytilus complex consists of distinct genetic lineages, including
Mytilus edulis, Mytilus galloprovincialis, Mytilus trossulus, and their
fertile hybrids. In overlapping areas, they create complex hybrid zones,
which have been investigated along European coasts, employing multi-marker
approaches. However, knowledge gaps still exist in the North-east Atlantic
region, in the middle of their hybrid zone around the island of Ireland,
regarding their genomic composition, population structure, and
connectivity. This study addresses these gaps by genotyping 781
individuals from 26 sites encompassing Ireland’s hybrid zone, including
both wild and farmed stocks from varying environmental conditions. Using a
selected panel of 72 SNP markers, we examined relationships among
genotypic composition, genetic diversity, isolation by distance (IBD), and
environmental variables to identify drivers of Mytilus genetic structure.
Results confirmed two distinct genetic lineages and their hybrids, with a
clear geographic pattern: the east coast of Ireland is dominated by pure
M. edulis genotype populations, while the south, west, and north coasts
exhibit varying degrees of admixture with M. galloprovincialis genotype.
Pure M. galloprovincialis populations were identified at specific sites on
the west and north coast. Sea current resistance and wave height were
significant predictors for both genotype composition and genetic
differentiation. This study corroborates previous findings and provides
the first comprehensive investigation of Irish Mytilus spp. Population
structure and connectivity using a multi-marker approach. The findings
highlight the importance of understanding the Mytilus complex’s
composition and population dynamics to inform sustainable aquaculture
practices and monitor potential climate change-driven shifts in the
North-east Atlantic region.