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Simulated single-cell and spatial transcriptomics datasets generated by scDesign3

NIAID Data Ecosystem2026-05-02 收录

单细胞转录组模拟

转录组学基准测试

数据链接：

https://zenodo.org/record/14561993 数据链接链接失效反馈

官方服务：

资源简介：

The 100 simulated datasets generated by scDesign3 in our benchmarking study.

应用场景：

创建时间：

2025-01-12

转录组学基准测试

测序平台比较

The Association of Biomolecular Resource Facilities (ABRF) study uses combinations of Reference RNAs to compare the performance of different sequencing platforms, including sequence quality, gene expr

NIAID Data Ecosystem50

Example dataset to run end-to-end pipeline (Xenium benchmarking)

转录组学基准测试

多发性硬化病理分析

This repository contains an. This example dataset is a reduced form of the one shared by Kukanja, Langseth et al. 2024. (https://doi.org/10.1016/j.cell.2024.02.030) and represents a human section of s

NIAID Data Ecosystem40

RNA_benchmark_references.zip

转录组学基准测试

RNA-seq数据分析

Reference genomes, gene annotations and gene expression information used for RNAseq benchmark.

NIAID Data Ecosystem20

RNA splicing analysis using heterogeneous and large RNA-seq datasets

RNA可变剪接

转录组学基准测试

The ubiquity of RNA-seq has led to many methods that use RNA-seq data to analyze variations in RNA splicing. However, available methods are not well suited for handling heterogeneous and large dataset

NIAID Data Ecosystem50

synthetic metagenome Raw sequence reads. synthetic metagenome

合成宏基因组模拟

转录组学基准测试

A set of complex, realistic data sets were simulated based on real Illumina HiSeq 2500 data (150 bp PE reads). Two "Groups (A,B)" consisting of 50 samples each were used to benchmark metatranscriptomi

NIAID Data Ecosystem30

Simulated single-cell and spatial transcriptomics datasets generated by scDesign3

资源简介：

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