Data for 'Accounting for digestion enzyme bias in Casanovo' (Melendez et al., 2024)

This upload contains two archives and an explanatory README.md that accompany Accounting for digestion enzyme bias in Casanovo (Melendez et al., 2024). The archive named 'mgf_data' contains all of the mgf files used in the paper. The archive named 'mztab_data' contains mztab formatted sequencing (and enzyme classification) predictions from all models trained in the paper. The README file describes the structure of each archive, the contents of each mgf and mztab file, and the sections of the paper that each mgf or mztab file relates to.