Additional file 14 of Infection with the sheep gastrointestinal nematode Teladorsagia circumcincta increases luminal pathobionts

Additional file 14. Differences in faecal microbial taxa abundance between groups using DESeq2. Statistically significant differences in the abundance of faecal microbial taxa calculated by DESeq2 (FDR-adjusted q<0.05) between (a) infected and uninfected, and (b) vaccinated and unvaccinated animals; and (c) between infected (i.e. Adj/Tc+ vs. Vac/Tc+) and (D) unvaccinated (i.e. Adj/Tc+ vs. Tc-) animals at different time points.