Supplementary data 1 – metadata and metabolic data for genomes used in Hidden from plain sight: Novel Chlamydiota diversity emerging from screening genomic and metagenomic data.
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Supplementary data 1 – metadata and metabolic data for genomes used in Hidden from plain sight: Novel Chlamydiota diversity emerging from screening genomic and metagenomic data.Contains all metadata for genomes assembled and genomes used, includingaccession numbers, CheckM scores and Gtdbtk taxonomy. You will also find raw data usedto produce the figures.Here you will find all metadata for genomes as well as some extra metabolic dataYellow tabs contain:S1 - Metadata for genomes assembled in this study extracted from SRAS2 - Metadata for environmental MAGs recovered from NCBI non redundant sequence databaseS3 - Metadata for additional Chlamydiota genomes usedRed tabs contain:S4 - AAI percentage similarity scores used to produce genera similarity networksS5 - ANIb percentage similarity scores used to produce species similarity networksS6 - CRISPRcas finder resultsS7 - KEGG pathway hitsS8 - KEGG pathway completenessS9 - Gene cluster presence absence matrix used in figure 4.3a for RhabdochlamydiaceaeS10 - Gene cluster presence absence matrix used in figure 4.3b for SimkaniaceaeS11 - Summaries for gene clusters from Anvi'o used to produce figure 1S12 - Interproscan results for contigs with blastp results matching the large HYDA domain of T. vaginalis (XP_001322682.1), Nyctotherus ovalis (CAA76373.1), and Thalassiosira pseudonana (XP_002295160.1)S13 - HYDDB results for contigs with blastp results matching the large HYDA domain of T. vaginalis (XP_001322682.1), Nyctotherus ovalis (CAA76373.1), and Thalassiosira pseudonana (XP_002295160.1)
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2023-03-20



