Rhizosphere 16S rRNA amplicon sequencing data, PICRUSt2-predicted functional profiles, and tuber amino acid profiles and GC–MS/MS peak tables from a potato field trial with an endophytic bacterial consortium

This dataset contains rhizosphere microbiome and tuber biochemical data from a potato field trial with an endophytic bacterial consortium. The archive includes: (i) a 16S rRNA gene (V3–V4) amplicon sequence variant (ASV) table, representative sequences and taxonomic assignments based on SILVA 138.1 for ten rhizosphere soil libraries; (ii) KO, EC and MetaCyc pathway abundance tables predicted using PICRUSt2 v2.6.3, with associated NSTI values; (iii) potato tuber amino acid analysis data; and (iv) tuber GC–MS/MS peak tables with solvent-blank data. Raw amplicon sequencing reads are deposited in the NCBI Sequence Read Archive under BioProject PRJNA1509732. Further details are provided in README.txt.