Data and scripts for: Tropical timber plantations as habitat for ground‐dwelling mammals: A camera‐trapping assessment in Central Panama

This dataset includes raw data, processed data, and scripts for "Tropical timber plantations as habitat for ground‐dwelling mammals: A camera‐trapping assessment in Central Panama". The folder contains the following data and R script files:

Primary data for occupancy and richness analyses:
"argos_observations_2019-03-11_22-26-52_Cam214_Startdate_edited.csv"

- Accompanying data for richness and occupancy analyeses:
"Argos.variables_canopy, distance to road and humanSet.csv";

Data for rarefaction curves:
"argos_spp_curves.csv"

Primary scripts:
"Monteza-et-al_2024_Species_Richness-Analysis-Script.R";
"Monteza-et-al_2024_Rarefaction curves-Script.R";
"Monteza-et-al_2024_Occupancy-Model-RNs_Script.R"

- Accompanying scripts to run the occupancy model and its density plots:
"Monteza-et-al_2024_RN_Occupancy.jags";
"Monteza-et-al_2024_RN_Occupancy_Density_Plots.R";
"Add.Trans_Dec09.R"

Original Article can be found in Biotropica: doi/10.1111/btp.13352